Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTCTGTGTGCCTGGA
.((.((((((((..(.((((((&))))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145262
GeneSymbolNCOA4
Binding site1040,1059
Score0.846
Seed0
Au0.515
Energy-17.6
Binding len19
Me-9.204
Phylopstem0.410752
Phylopflank0.3644579050000001
Longest consecutive pairings15
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure