Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTATCAATAAATACAGCCGAGGTTGCT
..((((((.((((((((....&.)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145303
GeneSymbolTMC4
Binding site2347,2378
Score0.962
Seed1
Au0.585
Energy-21.5
Binding len17
Me-6.013
Phylopstem-0.6780336249999999
Phylopflank-0.0029437983333333306
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure