Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCAGGTG
((((((((((............&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145306
GeneSymbolCDK6
Binding site9257,9268
Score1.0
Seed1
Au0.529
Energy-17.0
Binding len11
Me-13.224
Phylopstem0.5396385
Phylopflank0.48908264875000007
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure