Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCACACCGGCCACGATGTTACCTGAGGGACCTGCAGCTGCT
..((((((((((((.(.((((&.))))..).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145308
GeneSymbolLRTOMT
Binding site995,1040
Score0.923
Seed1
Au0.353
Energy-26.5
Binding len23
Me-5.692
Phylopstem3.4247643846153846
Phylopflank2.57683529
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure