Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGCTGTGCTGGGC
.(((((((((...(((((....&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145311
GeneSymbolPLIN1
Binding site1120,1137
Score0.923
Seed1
Au0.353
Energy-18.0
Binding len17
Me-11.254
Phylopstem-0.4194062333333333
Phylopflank-0.5302250725
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure