Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTTTCACTATGTTGGCCAGGC
.((((((...((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145339
GeneSymbolMDM2
Binding site6743,6766
Score0.846
Seed1
Au0.529
Energy-18.0
Binding len16
Me-8.406
Phylopstem-0.043941887499999985
Phylopflank-0.22933940875000008
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure