Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGGGTGCCCAGGG
.(((((..(((..(((((....&)))))..))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145346
GeneSymbolRBMXL3
Binding site3163,3180
Score0.846
Seed0
Au0.338
Energy-17.5
Binding len17
Me-12.287
Phylopstem2.694719
Phylopflank2.68683873
Longest consecutive pairings5
Position of longest consecutive pairings12
Pairings in 3prime end4
PositionCDS
2D Structure