Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGAGGACAACTGCAGTTGTCAAC
((((((((((((((((.....&.))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367321
GeneSymbolTRNT1
Binding site2913,2939
Score0.846
Seed1
Au0.632
Energy-22.8
Binding len19
Me-3.938
Phylopstem-0.13340981176470587
Phylopflank-0.24817226625
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end3
Position3UTR
2D Structure