Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGTGGCGGCTGCGGC
((((((((((.(((((.....&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367321
GeneSymbolTRNT1
Binding site21,38
Score0.846
Seed1
Au0.284
Energy-20.4
Binding len17
Me-6.762
Phylopstem0.17462388
Phylopflank0.1681318576470588
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure