Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGGCCCAAATCAATAAGATGAGAAATGGACAGCATTTCTGTGATGTGCAGCTGCAAG
((((((((((((((((.....&.)))))............))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145349
GeneSymbolIPP
Binding site173,234
Score1.0
Seed1
Au0.559
Energy-21.6
Binding len30
Me-3.938
Phylopstem1.6844050821428573
Phylopflank2.1444897025000005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure