Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTAGAACTTCAGCTGA
...((((((.((((.(((((.&))))).)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145355
GeneSymbolCBWD1
Binding site1686,1704
Score0.923
Seed0
Au0.721
Energy-19.6
Binding len18
Me-8.492
Phylopstem-0.8286990000000002
Phylopflank0.9563075137500003
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure