Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAACTACACTCCAGCATTGACAGAGCAGGAGGTGTATGCCCAGGTT
((((((((((((..........&.)))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145357
GeneSymbolSIN3A
Binding site1253,1300
Score1.0
Seed1
Au0.529
Energy-17.2
Binding len15
Me-7.052
Phylopstem1.5866677692307687
Phylopflank0.72961311
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end0
PositionCDS
2D Structure