Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCCGCGGTGTGCCAGA
..(((((((((..(((......&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001367323
GeneSymbolTRNT1
Binding site602,618
Score0.923
Seed1
Au0.485
Energy-15.9
Binding len14
Me-9.593
Phylopstem5.650741322222222
Phylopflank4.47613515
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure