Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTGGCCGTGGGGCTGTGTACATGTGTGTGCCCAGGG
.((((((((((((((((.((..&.)).))))).)))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145370
GeneSymbolPTPN3
Binding site5742,5781
Score0.923
Seed1
Au0.441
Energy-22.6
Binding len23
Me-3.793
Phylopstem3.116143666666667
Phylopflank3.64350847125
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure