Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGAAAAAAGCCAGGTT
(((((((......((((((...&)))))).......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145370
GeneSymbolPTPN3
Binding site3983,4004
Score0.885
Seed1
Au0.544
Energy-19.0
Binding len21
Me-16.011
Phylopstem6.278468571428571
Phylopflank4.974945517499998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure