Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCAGCAAATGTATGTTATACTGTCTCTCAAGGCCAGGTG
((((((((((((.(((.(((((&))))).)))..)))))..................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145370
GeneSymbolPTPN3
Binding site1146,1188
Score0.846
Seed1
Au0.647
Energy-17.1
Binding len42
Me-5.227
Phylopstem0.28957775
Phylopflank0.005880306249999967
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure