Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGTTTCCGGCGACCGCAGGCGCGGA
((((..((((((((((..((.&.)).))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367323
GeneSymbolTRNT1
Binding site230,259
Score0.846
Seed0
Au0.338
Energy-24.6
Binding len21
Me-9.958
Phylopstem-0.52050306
Phylopflank-0.3840668374999999
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end5
Position5UTR
2D Structure