Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAAAACTATTCAACATGTGGAAGTATTTTGTTATGCCAGGTC
(((((((((((((.(((..(((&.)))..))).)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145414
GeneSymbolCHM
Binding site300,343
Score0.846
Seed1
Au0.603
Energy-19.4
Binding len25
Me-4.794
Phylopstem0.2651336142857143
Phylopflank0.22234864399999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure