Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGCAGAGTGAAGTGAAAATAGCAAACAATCCAGGTGGCAGGG
.((((.(((((..(((((((((&)))))))))..)).........................))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145434
GeneSymbolZNF880
Binding site240,287
Score0.846
Seed0
Au0.515
Energy-18.3
Binding len47
Me-10.33
Phylopstem-0.12710475555555556
Phylopflank0.0015969199999999809
Longest consecutive pairings9
Position of longest consecutive pairings38
Pairings in 3prime end8
PositionCDS
2D Structure