Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACAGGGTTTATAGTAGTCTTGTGGACACAGAAATGCACAGGG
.((((((((((..(((((((..&)))))))..)).........................)))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145437
GeneSymbolLSS
Binding site3152,3198
Score0.846
Seed1
Au0.515
Energy-17.7
Binding len46
Me-8.429
Phylopstem5.2003965916666655
Phylopflank3.247087744999999
Longest consecutive pairings7
Position of longest consecutive pairings39
Pairings in 3prime end6
Position3UTR
2D Structure