Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTACAATGTTTTTGTCAGT
..((((((.(((.(((((((((&))))))))).)))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145464
GeneSymbolEXOG
Binding site1313,1336
Score0.923
Seed1
Au0.706
Energy-18.5
Binding len23
Me-7.303
Phylopstem0.20207714444444447
Phylopflank0.05224951749999997
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure