Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGCGGCTATTCTAAAAGTGTCTTTCTATCACTGTTAAGGGGGGG
...((((.(((((.(((((((&))))))).))))..............................).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001145514
GeneSymbolSCRN1
Binding site3219,3268
Score0.846
Seed0
Au0.544
Energy-24.5
Binding len49
Me-9.685
Phylopstem-0.2709410857142857
Phylopflank-0.5038680199999999
Longest consecutive pairings7
Position of longest consecutive pairings42
Pairings in 3prime end7
Position3UTR
2D Structure