Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCCTGCGCTCTGCTGTGTGCCTGGC
.((.((((((((..(((((...&.))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145783
GeneSymbolBORCS8
Binding site541,569
Score0.846
Seed0
Au0.382
Energy-20.4
Binding len18
Me-8.971
Phylopstem0.09552362499999999
Phylopflank0.09034186500000002
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure