Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACATTTTATGGCAGGTA
(((((.((((.(((((((....&))))))).)))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145798
GeneSymbolCACNB4
Binding site3820,3839
Score0.846
Seed0
Au0.735
Energy-19.2
Binding len19
Me-8.663
Phylopstem0.42710687142857146
Phylopflank1.34123691375
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end4
Position3UTR
2D Structure