Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTTGCTCTGTTGCCAGGC
.(((((((.(((..((((((((&)))))).))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145805
GeneSymbolIRGM
Binding site819,841
Score0.846
Seed1
Au0.5
Energy-20.7
Binding len22
Me-6.996
Phylopstem-0.6178628888888889
Phylopflank0.05527932375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure