Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGGTGAGCAGGAGCA
.(..(((((.(((((((((..&)))))))))..)))))..).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001145855
GeneSymbolSH3BP2
Binding site1956,1976
Score0.824
Seed0
Au0.382
Energy-26.2
Binding len20
Me-9.625
Phylopstem0.22828482222222224
Phylopflank-1.0906820625
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure