Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCGGACTGCACCCTGGCCTCCGCCCAGTGCAACGAGTACAGTGAGGAGGAGGAGCTGGTGA
(((((((((((((((((((.((&.)).))))))....................))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330990
GeneSymbolDHX30
Binding site3347,3409
Score0.846
Seed1
Au0.353
Energy-28.2
Binding len44
Me-3.938
Phylopstem3.6176377384615384
Phylopflank4.15911573
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure