Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTGCATGCCAGGA
.((((((((.((((........&)))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145923
GeneSymbolSCAPER
Binding site918,932
Score1.0
Seed1
Au0.647
Energy-17.8
Binding len14
Me-6.004
Phylopstem5.46200875
Phylopflank4.908377610125001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure