Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGCTCGGTGGAAGCCCTGCATGAGGTTCTACAGCTGCCTGCTGCC
..(((((.(((((((((....&.)))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367485
GeneSymbolSAC3D1
Binding site749,799
Score0.846
Seed0
Au0.294
Energy-22.3
Binding len18
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure