Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCAGGTTGTGGGCCATGCCAGGC
.(((((((((((((.(.(((((&)))))).))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001146017
GeneSymbolTJAP1
Binding site1976,2002
Score0.923
Seed1
Au0.382
Energy-19.3
Binding len26
Me-4.529
Phylopstem5.686503444444444
Phylopflank3.191410555
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure