Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGGATGTATGTCAGT
..((((((((((.(((......&)))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001146075
GeneSymbolRPAP3
Binding site1527,1544
Score0.846
Seed1
Au0.559
Energy-15.0
Binding len17
Me-6.246
Phylopstem0.39402423000000003
Phylopflank1.1163878874999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure