Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGAAGAGGGGCCAGTGG
(((((((((((((((.......&))).)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001367498
GeneSymbolCNTNAP5
Binding site9505,9522
Score1.0
Seed1
Au0.412
Energy-24.2
Binding len17
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure