Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTTTGGCTCTGGGGACAGTTGGCATGCCAGGC
.((((((((.((((((......&.))).)))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001146108
GeneSymbolPTGR1
Binding site399,433
Score0.846
Seed1
Au0.456
Energy-17.7
Binding len19
Me-5.036
Phylopstem0.14409400000000003
Phylopflank0.026370312500000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure