Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTTTCGACTGCAGCTGA
...((((((((((((...(((&))).....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367498
GeneSymbolCNTNAP5
Binding site3077,3098
Score0.846
Seed0
Au0.426
Energy-23.2
Binding len21
Me-6.748
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure