Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGCAGAGGAGAGAGACAGCGAGAAGAAGCCGCGGCTGG
...(((((((((((.......&.))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367498
GeneSymbolCNTNAP5
Binding site273,315
Score0.923
Seed0
Au0.426
Energy-21.2
Binding len13
Me-7.483
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure