Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGGGCCAGGTG
(((((((.(((...........&))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001146197
GeneSymbolCCDC168
Binding site15723,15735
Score0.846
Seed1
Au0.544
Energy-16.2
Binding len12
Me-12.712
Phylopstem0.194197
Phylopflank0.13460508699999996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure