Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGGTTGCCAGGTT
((((((((..((..........&))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001146210
GeneSymbolSPDYE6
Binding site228,241
Score1.0
Seed1
Au0.574
Energy-17.4
Binding len13
Me-9.351
Phylopstem-0.26777129999999993
Phylopflank-0.030803166749999993
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure