Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGTTGCCGGGG
.(((((((.(((..((((....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001146255
GeneSymbolPODNL1
Binding site286,301
Score0.923
Seed1
Au0.25
Energy-17.9
Binding len15
Me-6.996
Phylopstem-0.4712964428571428
Phylopflank-0.5121069149999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure