Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCCAACTATCACCAGTACATTGTGAAGTGCCATGGC
.((((((((((((((((.....&.))))))))...)))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001146259
GeneSymbolPIP4K2C
Binding site540,578
Score0.846
Seed1
Au0.471
Energy-18.9
Binding len22
Me-3.793
Phylopstem4.251902360000001
Phylopflank4.722521014999999
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end3
PositionCDS
2D Structure