Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAGGCAATGCCAGGA
.((((((((....(((......&)))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001146276
GeneSymbolNCEH1
Binding site1025,1041
Score0.846
Seed1
Au0.485
Energy-16.2
Binding len16
Me-12.497
Phylopstem0.922148
Phylopflank0.10312107000000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure