Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTTAGGAGGGCTGAGGTACATGTTTGCCAGGA
.(((((((.((.(((((..((.&.))..))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001146335
GeneSymbolSLC6A15
Binding site2386,2422
Score1.0
Seed1
Au0.632
Energy-19.2
Binding len21
Me-8.197
Phylopstem3.005967342857143
Phylopflank3.4229777925
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure