Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAGAAGTGGCCAGGC
.((((((.(((..(((((....&)))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001146684
GeneSymbolRNF222
Binding site2442,2460
Score0.923
Seed1
Au0.5
Energy-17.0
Binding len18
Me-10.743
Phylopstem0.009574666666666657
Phylopflank1.14335262
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure