Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTCATTAGAAATATAGGTGGTACACAGTGTGCACAGGG
.((((((((((..((((.....&.))))..)))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001153484
GeneSymbolSCOC
Binding site3578,3618
Score0.846
Seed1
Au0.544
Energy-18.8
Binding len19
Me-8.429
Phylopstem0.7702028181818182
Phylopflank0.04510029875000002
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end3
Position3UTR
2D Structure