Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCTGGCCACTTTTCTGAAGGGCTGCTGCAGTATGCTGGGTG
(((((((((((..(((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001159522
GeneSymbolZNF727
Binding site5453,5496
Score0.846
Seed1
Au0.485
Energy-21.3
Binding len18
Me-8.574
Phylopstem-0.09739363636363635
Phylopflank0.09296062500000006
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure