Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTCCAGAGGTTTGCCAGGC
.(((((((.((..((.((((..&)))).))...)).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001367600
GeneSymbolRAPGEF5
Binding site4175,4196
Score0.846
Seed1
Au0.544
Energy-18.7
Binding len21
Me-9.719
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure