Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCCCTGGCATTGGCCAGGG
.((((((...((((((......&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001159587
GeneSymbolCD109
Binding site5264,5286
Score0.923
Seed1
Au0.456
Energy-17.8
Binding len14
Me-8.406
Phylopstem0.23510163333333334
Phylopflank-0.42230497624999996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure