Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGCATGCACCTGTAGTCCCACCTACTCGGGAGGCTGAGGCAGGA
....(((((((((((((((((&)))))..........................)))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001159587
GeneSymbolCD109
Binding site6507,6554
Score0.846
Seed0
Au0.441
Energy-23.3
Binding len47
Me-9.547
Phylopstem-0.05504636956521739
Phylopflank0.04615185875000001
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure