Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACACTGTGAGCCAGGG
.((((((.((((.(((......&))).)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001159588
GeneSymbolCD109
Binding site4961,4977
Score0.923
Seed1
Au0.529
Energy-19.0
Binding len16
Me-7.396
Phylopstem-0.41296878333333337
Phylopflank-0.2501270525
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure