Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGCTGAGGCGGGTG
..((((..(((((.(((((..&))))))))))....)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001159588
GeneSymbolCD109
Binding site6223,6242
Score0.923
Seed0
Au0.441
Energy-23.3
Binding len19
Me-9.671
Phylopstem0.14746456
Phylopflank-0.030161216250000032
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure