Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTTGCTTTGTTGCCAGGC
.(((((((.((((.((((((((&)))))).)).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001160
GeneSymbolAPAF1
Binding site4765,4787
Score0.923
Seed1
Au0.471
Energy-21.8
Binding len22
Me-5.707
Phylopstem-0.23270166666666667
Phylopflank-0.11724496624999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure